Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891382.1_cds_XP_016446171.1_41056
CDS Infomation

[gene=LOC107771334] [db_xref=GeneID:107771334] [protein=interactor of constitutive active ROPs 2, chloroplastic-like isoform X2] [protein_id=XP_016446171.1] [location=join(2805..2806,3245..3422,4149..5753)] [gbkey=CDS]
Sequence

ATGAATATTTCTGTGGAGGTTCCACAAAGGAAATCTCCTGCACCAAAAACAGCTCGAAAG
CTCAAAATTCCAGGGTCGGATGCTGATTCATTGTCAGCTCCAAATCCAGCTACCAGTACA
CCTAAAGATAGGGGTGTCAAAGTTGTTGGCCGCCGTTCTCCACGAAATCCAGTGGTGGAG
AAGAAGAATCCAACCAAAGATACTGAACTGGAAACCGAGCTTGCTCAACTCCAAGATGAG
CTGAAGAAAGTAAAGGATCAGCTCACTTCATCGGAATCATTAAAGAGGAAGGCTCAAATA
GAGGCAGAGGAAGCTAAGAAGCAGCTTGCAGCCATGTCAGAGAAGCTCGAGGAGTCCGAG
AAACAACTAGTTGAGCTCTCCGATTCTGAGGATGCTCGAATCCTGGAGCTACGCAAGATC
TCACAAGATCGAGATCGAGCATGGCAATCTGAACTCGAGGCTGTCCAGAAGCAGCACGAA
TATGACTCAGCTGCTCTTGCTTCCGCCATGAATGAAATCCAGAAGCTTAAAAGTCAATTG
GACAGAGTGGCTGATTCTGAAGCCAATCAAGCTCGCCACGCTGAATCAGCTTATGCTGAG
ATTCAAAGCTTAAGGGTAGAACTTATGGAAACCCTTACATTGGTCGAAAAACTGAGAAAC
CAGCTAAACGATAGCAAAGAATCTGAGGCTTGTGCGCTTGAAGAAATGAGTAAAGCTCAG
ATGCAGCTAGAAATAGCAAAGATGACCGAGGATACTCTACGTTTGGAAGGTCTAAAAGCA
ATGGAGGCTTGCAAATCCTTGTCGTTGGAGTTAGAACAGTCAAAGAATCAAGTAGCTACA
TTGGAGGAACTTGTCAGTGAGCTCCAAACCGCTCAAGGTACCGTAGATGGAGTTAATGAG
GAAGCCGAGGAACTCAAAACTGAGGTCAGTAATCTAAAACTTGAGGTAAGCCAACTGAGA
ACTGCATTGGAGGTTTCGGAAAGAAGATATCAGGAAGAATATATCCAAAGCACTTTGCAG
ATTAGAAGTGCCTATGAGTTAGTTGAACAATCAAAGTCTGAATCAGCTCAGAGAGAGGCT
GAATGGGATGCGAAGTTAAAGGTTGCAAAAGCGGAGTTGGAAGAGTTAAAGGAGAAACTG
ATGAACAAAGAAGCTAAGCTACAAAACATTTCGGACGAAAATAAGGAGCTAAATATGCAA
GTTGAGAAAATACAGTCTGCTGATAGAGAATCTGAATTAGTAGCTGTACTGAAGGAATCA
GAGTCAACTTTGGGAGATTTGCGGGCGAGTTTATTGGACAAAGAGACAGAGTTGCAGAAT
ATTAAGGAGGAAAATGAGATGCTGAAGTCAGAAATCAAGAAGAGGGAAACCGAGGGTAGA
AAAGTGAATGATGAAACTCTTGCTGTGGCAGAAGCCGTGAAAGGTGTAGAAAGAGAGACT
CTGATGAAGTTAGGACATTTGACAGATGAAAGTAGCCGAAAGGCAGCACGTGTTACCGAG
CAGTTGGATGCAGCACACAATGCTAACTCCGAGATGGAAGCCGAGTTGAGGAGGTTAAAA
GTGCAAGCTGATCAGTGGAGGAAAGCTGCTGAGGCAGCTGCAGCTATGCTTTCAACCGGC
AACAACGGGAAATATGTAGAGAGAACAGGTTCTTTAGATTACCATACTATTGGTGGGAAG
CTGGATTCTCCATTATCTGAAGATACAGATGATGACTCGCCGAAGAAGAAGAATGGCAAC
ATGTTGAAAAAGATTGGTGTTTTATTGAAAAAAGGCCAGAAGTAG

Peptide Sequence

PEP ID

XP_016446171.1
PEP Infomation

PREDICTED: interactor of constitutive active ROPs 2, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MNISVEVPQRKSPAPKTARKLKIPGSDADSLSAPNPATSTPKDRGVKVVGRRSPRNPVVE
KKNPTKDTELETELAQLQDELKKVKDQLTSSESLKRKAQIEAEEAKKQLAAMSEKLEESE
KQLVELSDSEDARILELRKISQDRDRAWQSELEAVQKQHEYDSAALASAMNEIQKLKSQL
DRVADSEANQARHAESAYAEIQSLRVELMETLTLVEKLRNQLNDSKESEACALEEMSKAQ
MQLEIAKMTEDTLRLEGLKAMEACKSLSLELEQSKNQVATLEELVSELQTAQGTVDGVNE
EAEELKTEVSNLKLEVSQLRTALEVSERRYQEEYIQSTLQIRSAYELVEQSKSESAQREA
EWDAKLKVAKAELEELKEKLMNKEAKLQNISDENKELNMQVEKIQSADRESELVAVLKES
ESTLGDLRASLLDKETELQNIKEENEMLKSEIKKRETEGRKVNDETLAVAEAVKGVERET
LMKLGHLTDESSRKAARVTEQLDAAHNANSEMEAELRRLKVQADQWRKAAEAAAAMLSTG
NNGKYVERTGSLDYHTIGGKLDSPLSEDTDDDSPKKKNGNMLKKIGVLLKKGQK

Transcript Sequence

Gene sequence data has not been registered.